Jeez - sorry to hear that. I guess I got lucky with the power supply - it just fired straight up and hasn't missed a beat since. The amp - as most of you know - was a different kettle of fish entirely.
It's got to be simple though - if the cap is roasting, and the rectifier bridge is OK - then it has to be the cap. Mislabelled and electrically in backwards. If that is the case, make sure the rectifiers haven't got cooked into the bargain.
Try pulling the IXYS current limiters temporarily, and isolate the transformer, bridge and capacitor.